Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.38■□□□□ 0.37
Six2Q62232 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Six2Q62232 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.38■□□□□ 0.37
Six2Q62232 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Six2Q62232 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Six2Q62232 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Six2Q62232 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.38■□□□□ 0.37
Six2Q62232 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.37■□□□□ 0.37
Six2Q62232 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.37■□□□□ 0.37
Six2Q62232 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 Gm6345-202ENSMUST00000180900 204 ntBASIC17.37■□□□□ 0.37
Six2Q62232 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.37■□□□□ 0.37
Six2Q62232 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six2Q62232 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Six2Q62232 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Six2Q62232 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.36■□□□□ 0.37
Six2Q62232 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Six2Q62232 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Six2Q62232 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.36■□□□□ 0.37
Six2Q62232 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Six2Q62232 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Six2Q62232 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six2Q62232 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Six2Q62232 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Six2Q62232 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Six2Q62232 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.35■□□□□ 0.37
Six2Q62232 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.35■□□□□ 0.37
Six2Q62232 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six2Q62232 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Six2Q62232 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.34■□□□□ 0.37
Six2Q62232 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.34■□□□□ 0.37
Six2Q62232 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.34■□□□□ 0.37
Six2Q62232 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.34■□□□□ 0.37
Six2Q62232 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Six2Q62232 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Six2Q62232 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six2Q62232 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms