Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ecm1Q61508 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ecm1Q61508 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ecm1Q61508 Gm25911-201ENSMUST00000157621 56 ntBASIC17.99■□□□□ 0.47
Ecm1Q61508 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ecm1Q61508 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ecm1Q61508 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ecm1Q61508 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ecm1Q61508 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.98■□□□□ 0.47
Ecm1Q61508 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.98■□□□□ 0.47
Ecm1Q61508 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ecm1Q61508 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
Ecm1Q61508 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ecm1Q61508 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ecm1Q61508 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.97■□□□□ 0.47
Ecm1Q61508 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ecm1Q61508 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ecm1Q61508 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ecm1Q61508 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ecm1Q61508 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.97■□□□□ 0.47
Ecm1Q61508 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ecm1Q61508 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.97■□□□□ 0.47
Ecm1Q61508 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.97■□□□□ 0.47
Ecm1Q61508 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ecm1Q61508 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ecm1Q61508 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ecm1Q61508 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ecm1Q61508 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ecm1Q61508 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ecm1Q61508 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.96■□□□□ 0.47
Ecm1Q61508 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ecm1Q61508 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.96■□□□□ 0.47
Ecm1Q61508 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.96■□□□□ 0.47
Ecm1Q61508 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ecm1Q61508 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ecm1Q61508 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ecm1Q61508 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
Ecm1Q61508 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ecm1Q61508 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.96■□□□□ 0.47
Ecm1Q61508 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ecm1Q61508 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ecm1Q61508 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.96■□□□□ 0.46
Ecm1Q61508 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.96■□□□□ 0.46
Ecm1Q61508 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Ecm1Q61508 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.95■□□□□ 0.46
Ecm1Q61508 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.95■□□□□ 0.46
Ecm1Q61508 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Ecm1Q61508 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.95■□□□□ 0.46
Ecm1Q61508 Mir3113-201ENSMUST00000175478 76 ntBASIC17.95■□□□□ 0.46
Ecm1Q61508 Mir8117-201ENSMUST00000184773 107 ntBASIC17.95■□□□□ 0.46
Ecm1Q61508 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms