Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Gm37722-201ENSMUST00000193757 208 ntBASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim38Q5SZ99 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Gm11355-201ENSMUST00000121120 306 ntBASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Gm18032-201ENSMUST00000222541 538 ntBASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim38Q5SZ99 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Trim38Q5SZ99 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.3
Trim38Q5SZ99 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim38Q5SZ99 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim38Q5SZ99 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim38Q5SZ99 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim38Q5SZ99 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms