Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shroom1Q5SX79 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Gm44454-201ENSMUST00000198541 138 ntBASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shroom1Q5SX79 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Gm15165-201ENSMUST00000118140 502 ntBASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shroom1Q5SX79 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom1Q5SX79 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom1Q5SX79 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom1Q5SX79 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shroom1Q5SX79 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shroom1Q5SX79 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms