Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Gm34391-201ENSMUST00000203706 907 ntBASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps54Q5SPW0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Gm27867-201ENSMUST00000184778 125 ntBASIC19.52■□□□□ 0.72
Vps54Q5SPW0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Vps54Q5SPW0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps54Q5SPW0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps54Q5SPW0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps54Q5SPW0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Vps54Q5SPW0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps54Q5SPW0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps54Q5SPW0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Rprl3-201ENSMUST00000157400 290 ntBASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.51■□□□□ 0.71
Vps54Q5SPW0 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps54Q5SPW0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps54Q5SPW0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps54Q5SPW0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms