Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-4Q5R1H9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Mir6349-201ENSMUST00000184059 97 ntBASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-4Q5R1H9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 App-207ENSMUST00000227737 2827 ntBASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-4Q5R1H9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-4Q5R1H9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav7d-4Q5R1H9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms