Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mdc1Q5PSV9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Mdc1Q5PSV9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Mdc1Q5PSV9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Mdc1Q5PSV9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mdc1Q5PSV9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mdc1Q5PSV9 Gm44945-201ENSMUST00000206764 1187 ntBASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Gm7229-201ENSMUST00000214719 1007 ntBASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC21.18■□□□□ 0.98
Mdc1Q5PSV9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Gm26308-201ENSMUST00000157768 69 ntBASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Gm18622-201ENSMUST00000219361 595 ntBASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC21.17■□□□□ 0.98
Mdc1Q5PSV9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mdc1Q5PSV9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 AC158982.1-201ENSMUST00000228377 901 ntBASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Gm5253-201ENSMUST00000187104 1025 ntBASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Mdc1Q5PSV9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mdc1Q5PSV9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
Mdc1Q5PSV9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mdc1Q5PSV9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mdc1Q5PSV9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mdc1Q5PSV9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mdc1Q5PSV9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms