Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn2bQ56A07 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Gm13836-201ENSMUST00000121159 501 ntBASIC16.13■□□□□ 0.17
Scn2bQ56A07 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Gm7889-201ENSMUST00000185591 958 ntBASIC16.13■□□□□ 0.17
Scn2bQ56A07 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.13■□□□□ 0.17
Scn2bQ56A07 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.13■□□□□ 0.17
Scn2bQ56A07 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn2bQ56A07 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Gm18959-201ENSMUST00000208954 655 ntBASIC16.12■□□□□ 0.17
Scn2bQ56A07 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Actl10-202ENSMUST00000226583 1501 ntBASIC16.12■□□□□ 0.17
Scn2bQ56A07 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.12■□□□□ 0.17
Scn2bQ56A07 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn2bQ56A07 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.11■□□□□ 0.17
Scn2bQ56A07 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn2bQ56A07 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn2bQ56A07 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn2bQ56A07 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn2bQ56A07 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn2bQ56A07 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms