Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm1Q52KI8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm1Q52KI8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Srrm1Q52KI8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm1Q52KI8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Gm8969-201ENSMUST00000199694 526 ntBASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm1Q52KI8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Srrm1Q52KI8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm1Q52KI8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms