Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38aQ4FK66 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38aQ4FK66 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Gm18733-201ENSMUST00000173950 856 ntBASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Prpf38aQ4FK66 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.93■□□□□ 0.62
Prpf38aQ4FK66 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Mir6404-201ENSMUST00000183699 94 ntBASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38aQ4FK66 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms