Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.85■□□□□ 0.29
Ccdc61Q3UJV1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Mir8098-201ENSMUST00000184011 137 ntBASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Gm5864-201ENSMUST00000202263 970 ntBASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc61Q3UJV1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc61Q3UJV1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc61Q3UJV1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ccdc61Q3UJV1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Gm13884-201ENSMUST00000118103 829 ntBASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc61Q3UJV1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Gm25745-201ENSMUST00000174945 133 ntBASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc61Q3UJV1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Gm13216-201ENSMUST00000117145 591 ntBASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Gm44771-201ENSMUST00000206975 626 ntBASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Mzt1-203ENSMUST00000227948 952 ntBASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ccdc61Q3UJV1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms