Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.98□□□□□ -0.01
Spg11Q3UHA3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Spg11Q3UHA3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Spg11Q3UHA3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Spg11Q3UHA3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Spg11Q3UHA3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Spg11Q3UHA3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Spg11Q3UHA3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Spg11Q3UHA3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Mir8102-201ENSMUST00000184148 139 ntBASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Gm10253-201ENSMUST00000194270 940 ntBASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Spg11Q3UHA3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.96□□□□□ -0.01
Spg11Q3UHA3 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Spg11Q3UHA3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Spg11Q3UHA3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Spg11Q3UHA3 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.96□□□□□ -0.02
Spg11Q3UHA3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Spg11Q3UHA3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Spg11Q3UHA3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Gm7787-201ENSMUST00000216858 688 ntBASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Spg11Q3UHA3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Spg11Q3UHA3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms