Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim7Q3TJD7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pdlim7Q3TJD7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim7Q3TJD7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Gm5682-201ENSMUST00000173402 505 ntBASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim7Q3TJD7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pdlim7Q3TJD7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Pdlim7Q3TJD7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pdlim7Q3TJD7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Gm27646-201ENSMUST00000183989 110 ntBASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pdlim7Q3TJD7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Gm5186-201ENSMUST00000218781 920 ntBASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim7Q3TJD7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Gm11764-201ENSMUST00000120221 623 ntBASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim7Q3TJD7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim7Q3TJD7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim7Q3TJD7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim7Q3TJD7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim7Q3TJD7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms