Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.95□□□□□ -0.5
Hspg2Q05793 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.95□□□□□ -0.5
Hspg2Q05793 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hspg2Q05793 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.95□□□□□ -0.5
Hspg2Q05793 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.95□□□□□ -0.5
Hspg2Q05793 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.95□□□□□ -0.5
Hspg2Q05793 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hspg2Q05793 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.95□□□□□ -0.5
Hspg2Q05793 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.95□□□□□ -0.5
Hspg2Q05793 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Hspg2Q05793 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hspg2Q05793 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Gm12497-201ENSMUST00000138778 237 ntBASIC11.94□□□□□ -0.5
Hspg2Q05793 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.94□□□□□ -0.5
Hspg2Q05793 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.94□□□□□ -0.5
Hspg2Q05793 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hspg2Q05793 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Hspg2Q05793 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Mir7023-201ENSMUST00000185093 64 ntBASIC11.94□□□□□ -0.5
Hspg2Q05793 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.94□□□□□ -0.5
Hspg2Q05793 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hspg2Q05793 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Gm7222-201ENSMUST00000117512 906 ntBASIC11.93□□□□□ -0.5
Hspg2Q05793 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hspg2Q05793 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.93□□□□□ -0.5
Hspg2Q05793 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hspg2Q05793 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hspg2Q05793 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Hspg2Q05793 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms