Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.17■□□□□ 0.18
Crnkl1P63154 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Crnkl1P63154 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.17■□□□□ 0.18
Crnkl1P63154 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Crnkl1P63154 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.17■□□□□ 0.18
Crnkl1P63154 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.17■□□□□ 0.18
Crnkl1P63154 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.17■□□□□ 0.18
Crnkl1P63154 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crnkl1P63154 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Crnkl1P63154 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Crnkl1P63154 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Crnkl1P63154 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.16■□□□□ 0.18
Crnkl1P63154 Gm5643-201ENSMUST00000117081 966 ntBASIC16.16■□□□□ 0.18
Crnkl1P63154 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Crnkl1P63154 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.16■□□□□ 0.18
Crnkl1P63154 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.16■□□□□ 0.18
Crnkl1P63154 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Crnkl1P63154 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crnkl1P63154 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Crnkl1P63154 Gm13401-201ENSMUST00000117074 291 ntBASIC16.15■□□□□ 0.18
Crnkl1P63154 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.15■□□□□ 0.18
Crnkl1P63154 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.15■□□□□ 0.18
Crnkl1P63154 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.15■□□□□ 0.18
Crnkl1P63154 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.15■□□□□ 0.18
Crnkl1P63154 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Crnkl1P63154 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.15■□□□□ 0.18
Crnkl1P63154 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Crnkl1P63154 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Crnkl1P63154 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.14■□□□□ 0.17
Crnkl1P63154 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.14■□□□□ 0.17
Crnkl1P63154 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.14■□□□□ 0.17
Crnkl1P63154 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Crnkl1P63154 Mtag2-201ENSMUST00000058665 714 ntBASIC16.14■□□□□ 0.17
Crnkl1P63154 Gm10812-201ENSMUST00000099864 546 ntBASIC16.14■□□□□ 0.17
Crnkl1P63154 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms