Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lsm6P62313 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lsm6P62313 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.29□□□□□ -0.12
Lsm6P62313 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Lsm6P62313 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lsm6P62313 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.29□□□□□ -0.12
Lsm6P62313 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.29□□□□□ -0.12
Lsm6P62313 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm6P62313 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Lsm6P62313 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lsm6P62313 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm6P62313 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Lsm6P62313 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lsm6P62313 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.28□□□□□ -0.12
Lsm6P62313 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lsm6P62313 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm6P62313 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lsm6P62313 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.28□□□□□ -0.12
Lsm6P62313 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm6P62313 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lsm6P62313 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm6P62313 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.27□□□□□ -0.12
Lsm6P62313 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lsm6P62313 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Lsm6P62313 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm6P62313 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.27□□□□□ -0.13
Lsm6P62313 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Gm10231-201ENSMUST00000181584 441 ntBASIC14.27□□□□□ -0.13
Lsm6P62313 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.27□□□□□ -0.13
Lsm6P62313 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Lsm6P62313 Gm10175-202ENSMUST00000208752 441 ntBASIC14.27□□□□□ -0.13
Lsm6P62313 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.27□□□□□ -0.13
Lsm6P62313 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Lsm6P62313 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lsm6P62313 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm6P62313 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.26□□□□□ -0.13
Lsm6P62313 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
Lsm6P62313 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm6P62313 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms