Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Irf5P56477 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.24■□□□□ 0.67
Irf5P56477 Gm18206-201ENSMUST00000207027 926 ntBASIC19.24■□□□□ 0.67
Irf5P56477 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.24■□□□□ 0.67
Irf5P56477 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Irf5P56477 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf5P56477 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.24■□□□□ 0.67
Irf5P56477 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf5P56477 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.23■□□□□ 0.67
Irf5P56477 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.23■□□□□ 0.67
Irf5P56477 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Irf5P56477 Phf7-203ENSMUST00000226565 1971 ntBASIC19.23■□□□□ 0.67
Irf5P56477 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.23■□□□□ 0.67
Irf5P56477 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.23■□□□□ 0.67
Irf5P56477 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.23■□□□□ 0.67
Irf5P56477 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.23■□□□□ 0.67
Irf5P56477 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.23■□□□□ 0.67
Irf5P56477 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.23■□□□□ 0.67
Irf5P56477 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.23■□□□□ 0.67
Irf5P56477 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Irf5P56477 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Irf5P56477 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf5P56477 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Irf5P56477 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.22■□□□□ 0.67
Irf5P56477 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.22■□□□□ 0.67
Irf5P56477 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.22■□□□□ 0.67
Irf5P56477 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.22■□□□□ 0.67
Irf5P56477 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.22■□□□□ 0.67
Irf5P56477 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Irf5P56477 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.22■□□□□ 0.67
Irf5P56477 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.22■□□□□ 0.67
Irf5P56477 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf5P56477 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Irf5P56477 Gm13312-201ENSMUST00000119631 718 ntBASIC19.21■□□□□ 0.67
Irf5P56477 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.21■□□□□ 0.67
Irf5P56477 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.21■□□□□ 0.67
Irf5P56477 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Irf5P56477 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.21■□□□□ 0.67
Irf5P56477 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf5P56477 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.21■□□□□ 0.67
Irf5P56477 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Rprl3-201ENSMUST00000157400 290 ntBASIC19.2■□□□□ 0.66
Irf5P56477 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.2■□□□□ 0.66
Irf5P56477 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Irf5P56477 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Irf5P56477 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Irf5P56477 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf5P56477 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Irf5P56477 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms