Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cks2P56390 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cks2P56390 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cks2P56390 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cks2P56390 Gm12527-201ENSMUST00000117967 564 ntBASIC13.62□□□□□ -0.23
Cks2P56390 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.62□□□□□ -0.23
Cks2P56390 Gm7791-201ENSMUST00000219066 539 ntBASIC13.62□□□□□ -0.23
Cks2P56390 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks2P56390 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.62□□□□□ -0.23
Cks2P56390 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.62□□□□□ -0.23
Cks2P56390 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cks2P56390 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.61□□□□□ -0.23
Cks2P56390 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cks2P56390 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.61□□□□□ -0.23
Cks2P56390 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.61□□□□□ -0.23
Cks2P56390 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cks2P56390 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cks2P56390 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.61□□□□□ -0.23
Cks2P56390 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cks2P56390 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cks2P56390 Actl10-202ENSMUST00000226583 1501 ntBASIC13.6□□□□□ -0.23
Cks2P56390 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cks2P56390 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cks2P56390 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cks2P56390 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cks2P56390 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.6□□□□□ -0.23
Cks2P56390 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.6□□□□□ -0.23
Cks2P56390 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.6□□□□□ -0.23
Cks2P56390 Timm23-208ENSMUST00000226683 750 ntBASIC13.6□□□□□ -0.23
Cks2P56390 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cks2P56390 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Cks2P56390 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.6□□□□□ -0.23
Cks2P56390 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.6□□□□□ -0.23
Cks2P56390 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks2P56390 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cks2P56390 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cks2P56390 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.59□□□□□ -0.23
Cks2P56390 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.59□□□□□ -0.23
Cks2P56390 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.59□□□□□ -0.23
Cks2P56390 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks2P56390 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.59□□□□□ -0.23
Cks2P56390 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms