Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nub1P54729 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nub1P54729 Gm11950-201ENSMUST00000121615 838 ntBASIC17.53■□□□□ 0.4
Nub1P54729 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.53■□□□□ 0.4
Nub1P54729 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Nub1P54729 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nub1P54729 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Nub1P54729 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Nub1P54729 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nub1P54729 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nub1P54729 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nub1P54729 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.52■□□□□ 0.4
Nub1P54729 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nub1P54729 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nub1P54729 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Nub1P54729 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nub1P54729 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nub1P54729 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nub1P54729 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nub1P54729 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
Nub1P54729 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nub1P54729 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nub1P54729 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nub1P54729 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nub1P54729 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.51■□□□□ 0.39
Nub1P54729 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.51■□□□□ 0.39
Nub1P54729 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.51■□□□□ 0.39
Nub1P54729 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nub1P54729 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nub1P54729 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Nub1P54729 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.5■□□□□ 0.39
Nub1P54729 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Nub1P54729 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nub1P54729 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.5■□□□□ 0.39
Nub1P54729 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nub1P54729 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nub1P54729 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.49■□□□□ 0.39
Nub1P54729 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.49■□□□□ 0.39
Nub1P54729 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nub1P54729 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nub1P54729 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.49■□□□□ 0.39
Nub1P54729 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms