Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brca1P48754 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brca1P48754 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Brca1P48754 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brca1P48754 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.21■□□□□ 0.51
Brca1P48754 Gm9682-201ENSMUST00000197505 556 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Gm45612-201ENSMUST00000211320 160 ntBASIC18.21■□□□□ 0.51
Brca1P48754 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.2■□□□□ 0.5
Brca1P48754 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.2■□□□□ 0.5
Brca1P48754 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.2■□□□□ 0.5
Brca1P48754 Gm44492-201ENSMUST00000197012 141 ntBASIC18.2■□□□□ 0.5
Brca1P48754 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brca1P48754 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Brca1P48754 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Gm18622-201ENSMUST00000219361 595 ntBASIC18.19■□□□□ 0.5
Brca1P48754 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.19■□□□□ 0.5
Brca1P48754 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.19■□□□□ 0.5
Brca1P48754 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Brca1P48754 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.19■□□□□ 0.5
Brca1P48754 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Brca1P48754 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brca1P48754 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brca1P48754 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brca1P48754 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brca1P48754 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.18■□□□□ 0.5
Brca1P48754 Gm17271-201ENSMUST00000165535 355 ntBASIC18.18■□□□□ 0.5
Brca1P48754 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brca1P48754 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Brca1P48754 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.18■□□□□ 0.5
Brca1P48754 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.18■□□□□ 0.5
Brca1P48754 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Brca1P48754 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.18■□□□□ 0.5
Brca1P48754 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brca1P48754 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.18■□□□□ 0.5
Brca1P48754 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.18■□□□□ 0.5
Brca1P48754 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.18■□□□□ 0.5
Brca1P48754 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brca1P48754 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Brca1P48754 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Brca1P48754 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Gm6257-201ENSMUST00000163864 910 ntBASIC18.17■□□□□ 0.5
Brca1P48754 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Brca1P48754 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.17■□□□□ 0.5
Brca1P48754 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Brca1P48754 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Brca1P48754 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Brca1P48754 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brca1P48754 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Brca1P48754 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.16■□□□□ 0.5
Brca1P48754 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.16■□□□□ 0.5
Brca1P48754 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.16■□□□□ 0.5
Brca1P48754 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Gm15427-201ENSMUST00000117288 531 ntBASIC18.16■□□□□ 0.5
Brca1P48754 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.16■□□□□ 0.5
Brca1P48754 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.16■□□□□ 0.5
Brca1P48754 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.16■□□□□ 0.5
Brca1P48754 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brca1P48754 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms