Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GdnfP48540 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.29□□□□□ -0.12
GdnfP48540 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.29□□□□□ -0.12
GdnfP48540 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.29□□□□□ -0.12
GdnfP48540 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
GdnfP48540 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GdnfP48540 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
GdnfP48540 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.28□□□□□ -0.12
GdnfP48540 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.28□□□□□ -0.12
GdnfP48540 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.28□□□□□ -0.12
GdnfP48540 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.28□□□□□ -0.12
GdnfP48540 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GdnfP48540 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
GdnfP48540 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.28□□□□□ -0.12
GdnfP48540 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.28□□□□□ -0.12
GdnfP48540 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.28□□□□□ -0.12
GdnfP48540 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GdnfP48540 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GdnfP48540 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GdnfP48540 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
GdnfP48540 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GdnfP48540 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GdnfP48540 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GdnfP48540 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GdnfP48540 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.27□□□□□ -0.13
GdnfP48540 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.27□□□□□ -0.13
GdnfP48540 Gm38027-201ENSMUST00000192315 235 ntBASIC14.27□□□□□ -0.13
GdnfP48540 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.27□□□□□ -0.13
GdnfP48540 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.27□□□□□ -0.13
GdnfP48540 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
GdnfP48540 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.27□□□□□ -0.13
GdnfP48540 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.27□□□□□ -0.13
GdnfP48540 Timm23-208ENSMUST00000226683 750 ntBASIC14.27□□□□□ -0.13
GdnfP48540 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
GdnfP48540 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.27□□□□□ -0.13
GdnfP48540 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.27□□□□□ -0.13
GdnfP48540 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.27□□□□□ -0.13
GdnfP48540 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GdnfP48540 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GdnfP48540 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms