Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prox1P48437 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.69■□□□□ 0.1
Prox1P48437 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prox1P48437 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Prox1P48437 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Prox1P48437 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Prox1P48437 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prox1P48437 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prox1P48437 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prox1P48437 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prox1P48437 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prox1P48437 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Prox1P48437 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prox1P48437 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.68■□□□□ 0.1
Prox1P48437 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Prox1P48437 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.68■□□□□ 0.1
Prox1P48437 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.68■□□□□ 0.1
Prox1P48437 Gm43183-201ENSMUST00000200632 547 ntBASIC15.68■□□□□ 0.1
Prox1P48437 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.68■□□□□ 0.1
Prox1P48437 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.68■□□□□ 0.1
Prox1P48437 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Prox1P48437 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prox1P48437 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.67■□□□□ 0.1
Prox1P48437 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Prox1P48437 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Prox1P48437 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Prox1P48437 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.67■□□□□ 0.1
Prox1P48437 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Gm37856-201ENSMUST00000191634 999 ntBASIC15.67■□□□□ 0.1
Prox1P48437 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.67■□□□□ 0.1
Prox1P48437 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.67■□□□□ 0.1
Prox1P48437 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Gm10812-201ENSMUST00000099864 546 ntBASIC15.67■□□□□ 0.1
Prox1P48437 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Prox1P48437 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Prox1P48437 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Prox1P48437 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Prob1-201ENSMUST00000097619 3021 ntBASIC15.67■□□□□ 0.1
Prox1P48437 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.67■□□□□ 0.1
Prox1P48437 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Prox1P48437 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prox1P48437 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.66■□□□□ 0.1
Prox1P48437 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.66■□□□□ 0.1
Prox1P48437 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.66■□□□□ 0.1
Prox1P48437 Gm17661-201ENSMUST00000170317 270 ntBASIC15.66■□□□□ 0.1
Prox1P48437 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.66■□□□□ 0.1
Prox1P48437 Trmt13-210ENSMUST00000198454 880 ntBASIC15.66■□□□□ 0.1
Prox1P48437 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Prox1P48437 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prox1P48437 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prox1P48437 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prox1P48437 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prox1P48437 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prox1P48437 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.65■□□□□ 0.1
Prox1P48437 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prox1P48437 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prox1P48437 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms