Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf6P43028 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf6P43028 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf6P43028 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf6P43028 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gdf6P43028 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gdf6P43028 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.07■□□□□ 0.32
Gdf6P43028 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gdf6P43028 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.07■□□□□ 0.32
Gdf6P43028 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.07■□□□□ 0.32
Gdf6P43028 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.07■□□□□ 0.32
Gdf6P43028 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gdf6P43028 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.07■□□□□ 0.32
Gdf6P43028 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gdf6P43028 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Gdf6P43028 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf6P43028 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.06■□□□□ 0.32
Gdf6P43028 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.06■□□□□ 0.32
Gdf6P43028 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gdf6P43028 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.06■□□□□ 0.32
Gdf6P43028 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Gdf6P43028 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.06■□□□□ 0.32
Gdf6P43028 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf6P43028 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Gdf6P43028 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.05■□□□□ 0.32
Gdf6P43028 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.05■□□□□ 0.32
Gdf6P43028 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.05■□□□□ 0.32
Gdf6P43028 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Gm4459-201ENSMUST00000118750 468 ntBASIC17.05■□□□□ 0.32
Gdf6P43028 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.05■□□□□ 0.32
Gdf6P43028 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.05■□□□□ 0.32
Gdf6P43028 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.05■□□□□ 0.32
Gdf6P43028 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.05■□□□□ 0.32
Gdf6P43028 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gdf6P43028 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf6P43028 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gdf6P43028 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gdf6P43028 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gdf6P43028 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gdf6P43028 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gdf6P43028 Gm25406-201ENSMUST00000157599 105 ntBASIC17.04■□□□□ 0.32
Gdf6P43028 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gdf6P43028 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Gdf6P43028 Gm2651-201ENSMUST00000203560 838 ntBASIC17.04■□□□□ 0.32
Gdf6P43028 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.04■□□□□ 0.32
Gdf6P43028 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gdf6P43028 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gdf6P43028 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.04■□□□□ 0.32
Gdf6P43028 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gdf6P43028 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms