Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Rom1P32958 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rom1P32958 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Gm13158-201ENSMUST00000122007 736 ntBASIC12.93□□□□□ -0.34
Rom1P32958 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.93□□□□□ -0.34
Rom1P32958 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.93□□□□□ -0.34
Rom1P32958 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rom1P32958 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Rom1P32958 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rom1P32958 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rom1P32958 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rom1P32958 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.93□□□□□ -0.34
Rom1P32958 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.93□□□□□ -0.34
Rom1P32958 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rom1P32958 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rom1P32958 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Rom1P32958 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rom1P32958 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Gm13148-201ENSMUST00000118892 745 ntBASIC12.92□□□□□ -0.34
Rom1P32958 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Mir5133-201ENSMUST00000174955 77 ntBASIC12.92□□□□□ -0.34
Rom1P32958 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rom1P32958 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rom1P32958 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rom1P32958 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rom1P32958 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rom1P32958 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rom1P32958 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rom1P32958 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rom1P32958 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.91□□□□□ -0.34
Rom1P32958 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rom1P32958 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.91□□□□□ -0.34
Rom1P32958 Gm9731-201ENSMUST00000209480 747 ntBASIC12.91□□□□□ -0.34
Rom1P32958 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.91□□□□□ -0.34
Rom1P32958 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rom1P32958 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rom1P32958 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rom1P32958 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rom1P32958 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rom1P32958 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rom1P32958 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rom1P32958 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rom1P32958 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rom1P32958 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.9□□□□□ -0.34
Rom1P32958 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.9□□□□□ -0.34
Rom1P32958 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms