Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd44P15379 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cd44P15379 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cd44P15379 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd44P15379 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd44P15379 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cd44P15379 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cd44P15379 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd44P15379 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Gm36967-201ENSMUST00000193814 266 ntBASIC17.11■□□□□ 0.33
Cd44P15379 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.11■□□□□ 0.33
Cd44P15379 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.11■□□□□ 0.33
Cd44P15379 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd44P15379 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.1■□□□□ 0.33
Cd44P15379 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cd44P15379 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cd44P15379 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd44P15379 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cd44P15379 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd44P15379 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Cd44P15379 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.09■□□□□ 0.33
Cd44P15379 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.09■□□□□ 0.33
Cd44P15379 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.09■□□□□ 0.33
Cd44P15379 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd44P15379 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cd44P15379 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cd44P15379 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd44P15379 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd44P15379 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cd44P15379 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.08■□□□□ 0.33
Cd44P15379 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cd44P15379 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms