Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Msh3P13705 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Msh3P13705 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.93■□□□□ 0.46
Msh3P13705 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Msh3P13705 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Msh3P13705 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.93■□□□□ 0.46
Msh3P13705 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh3P13705 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Msh3P13705 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.92■□□□□ 0.46
Msh3P13705 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh3P13705 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Msh3P13705 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.91■□□□□ 0.46
Msh3P13705 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.91■□□□□ 0.46
Msh3P13705 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Msh3P13705 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.91■□□□□ 0.46
Msh3P13705 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Msh3P13705 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Msh3P13705 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh3P13705 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Msh3P13705 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.9■□□□□ 0.46
Msh3P13705 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.9■□□□□ 0.46
Msh3P13705 Mir6404-201ENSMUST00000183699 94 ntBASIC17.9■□□□□ 0.46
Msh3P13705 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Msh3P13705 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.9■□□□□ 0.46
Msh3P13705 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Msh3P13705 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Msh3P13705 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh3P13705 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.9■□□□□ 0.46
Msh3P13705 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Msh3P13705 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Msh3P13705 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Msh3P13705 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Msh3P13705 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Msh3P13705 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.89■□□□□ 0.45
Msh3P13705 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.89■□□□□ 0.45
Msh3P13705 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.89■□□□□ 0.45
Msh3P13705 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Msh3P13705 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Dancr-204ENSMUST00000132389 2347 ntBASIC17.89■□□□□ 0.45
Msh3P13705 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh3P13705 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Msh3P13705 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.88■□□□□ 0.45
Msh3P13705 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh3P13705 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms