Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccl3P10855 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.37□□□□□ -0.11
Ccl3P10855 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl3P10855 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccl3P10855 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Gm14822-201ENSMUST00000122247 291 ntBASIC14.36□□□□□ -0.11
Ccl3P10855 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccl3P10855 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccl3P10855 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.36□□□□□ -0.11
Ccl3P10855 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl3P10855 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ccl3P10855 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.35□□□□□ -0.11
Ccl3P10855 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ccl3P10855 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccl3P10855 Mir6404-201ENSMUST00000183699 94 ntBASIC14.35□□□□□ -0.11
Ccl3P10855 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccl3P10855 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccl3P10855 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl3P10855 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccl3P10855 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccl3P10855 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.34□□□□□ -0.11
Ccl3P10855 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccl3P10855 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccl3P10855 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccl3P10855 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccl3P10855 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccl3P10855 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccl3P10855 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl3P10855 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
Ccl3P10855 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccl3P10855 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccl3P10855 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.33□□□□□ -0.12
Ccl3P10855 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl3P10855 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms