Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.04■□□□□ -0
P06336 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
P06336 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P06336 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P06336 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
P06336 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.04■□□□□ -0
P06336 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.04■□□□□ -0
P06336 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.04■□□□□ -0
P06336 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.04■□□□□ -0
P06336 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
P06336 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P06336 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.04■□□□□ -0
P06336 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.04■□□□□ -0
P06336 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P06336 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.04■□□□□ -0
P06336 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P06336 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.03■□□□□ -0
P06336 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
P06336 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.03■□□□□ -0
P06336 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.03■□□□□ -0
P06336 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.03■□□□□ -0
P06336 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
P06336 Gm27704-201ENSMUST00000185094 107 ntBASIC15.03■□□□□ -0
P06336 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.03■□□□□ -0
P06336 Gm36967-201ENSMUST00000193814 266 ntBASIC15.03■□□□□ -0
P06336 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.03■□□□□ -0
P06336 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
P06336 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.03■□□□□ -0
P06336 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
P06336 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
P06336 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
P06336 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
P06336 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.03■□□□□ -0
P06336 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
P06336 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.03■□□□□ -0
P06336 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06336 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06336 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06336 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
P06336 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
P06336 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
P06336 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06336 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.02■□□□□ -0
P06336 Gm14859-201ENSMUST00000117752 357 ntBASIC15.02■□□□□ -0
P06336 Gm44430-201ENSMUST00000203376 995 ntBASIC15.02■□□□□ -0
P06336 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06336 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06336 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
P06336 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.02□□□□□ -0.01
P06336 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
P06336 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P06336 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
P06336 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
P06336 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
P06336 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.01□□□□□ -0.01
P06336 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
P06336 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
P06336 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
P06336 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
P06336 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.01□□□□□ -0.01
P06336 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.01□□□□□ -0.01
P06336 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
P06336 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06336 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06336 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
P06336 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06336 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms