Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hoxa3P02831 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.65□□□□□ -0.22
Hoxa3P02831 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.65□□□□□ -0.22
Hoxa3P02831 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.65□□□□□ -0.22
Hoxa3P02831 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.65□□□□□ -0.22
Hoxa3P02831 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Hoxa3P02831 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa3P02831 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.65□□□□□ -0.22
Hoxa3P02831 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.64□□□□□ -0.23
Hoxa3P02831 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.64□□□□□ -0.23
Hoxa3P02831 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.64□□□□□ -0.23
Hoxa3P02831 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.64□□□□□ -0.23
Hoxa3P02831 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hoxa3P02831 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.64□□□□□ -0.23
Hoxa3P02831 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Gm29707-201ENSMUST00000196325 491 ntBASIC13.64□□□□□ -0.23
Hoxa3P02831 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.64□□□□□ -0.23
Hoxa3P02831 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa3P02831 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Hoxa3P02831 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.63□□□□□ -0.23
Hoxa3P02831 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.63□□□□□ -0.23
Hoxa3P02831 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.63□□□□□ -0.23
Hoxa3P02831 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Hoxa3P02831 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.63□□□□□ -0.23
Hoxa3P02831 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.63□□□□□ -0.23
Hoxa3P02831 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hoxa3P02831 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.63□□□□□ -0.23
Hoxa3P02831 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.63□□□□□ -0.23
Hoxa3P02831 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa3P02831 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa3P02831 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.62□□□□□ -0.23
Hoxa3P02831 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxa3P02831 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.62□□□□□ -0.23
Hoxa3P02831 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa3P02831 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa3P02831 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa3P02831 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa3P02831 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa3P02831 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms