Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.4■□□□□ 0.06
Matn4O89029 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.4■□□□□ 0.06
Matn4O89029 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.4■□□□□ 0.06
Matn4O89029 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Matn4O89029 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.4■□□□□ 0.06
Matn4O89029 Gm18421-201ENSMUST00000204122 625 ntBASIC15.4■□□□□ 0.06
Matn4O89029 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.4■□□□□ 0.06
Matn4O89029 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn4O89029 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.39■□□□□ 0.05
Matn4O89029 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Matn4O89029 Gm27463-201ENSMUST00000183569 57 ntBASIC15.39■□□□□ 0.05
Matn4O89029 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Matn4O89029 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Matn4O89029 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn4O89029 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Matn4O89029 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.38■□□□□ 0.05
Matn4O89029 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.38■□□□□ 0.05
Matn4O89029 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Matn4O89029 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Matn4O89029 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Matn4O89029 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn4O89029 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Matn4O89029 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.37■□□□□ 0.05
Matn4O89029 Gm13168-201ENSMUST00000121771 632 ntBASIC15.37■□□□□ 0.05
Matn4O89029 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Matn4O89029 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms