Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Best1O88870 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Best1O88870 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.61■□□□□ 0.09
Best1O88870 Gm44357-201ENSMUST00000195897 142 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm19658-201ENSMUST00000196231 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44367-201ENSMUST00000196836 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44350-201ENSMUST00000197197 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44390-201ENSMUST00000197533 144 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44313-201ENSMUST00000198018 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44486-201ENSMUST00000198508 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44314-201ENSMUST00000199263 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44394-201ENSMUST00000199558 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44484-201ENSMUST00000199873 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44466-201ENSMUST00000200264 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 Gm44359-201ENSMUST00000200671 138 ntBASIC15.61■□□□□ 0.09
Best1O88870 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.61■□□□□ 0.09
Best1O88870 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Best1O88870 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Best1O88870 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.61■□□□□ 0.09
Best1O88870 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Best1O88870 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Best1O88870 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Best1O88870 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Best1O88870 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Best1O88870 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Gm4459-201ENSMUST00000118750 468 ntBASIC15.6■□□□□ 0.09
Best1O88870 Gm7862-201ENSMUST00000121461 292 ntBASIC15.6■□□□□ 0.09
Best1O88870 Gm11452-201ENSMUST00000122376 690 ntBASIC15.6■□□□□ 0.09
Best1O88870 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Best1O88870 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Best1O88870 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Best1O88870 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.6■□□□□ 0.09
Best1O88870 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Gm8655-201ENSMUST00000221159 852 ntBASIC15.6■□□□□ 0.09
Best1O88870 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.6■□□□□ 0.09
Best1O88870 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.6■□□□□ 0.09
Best1O88870 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.6■□□□□ 0.09
Best1O88870 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Best1O88870 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Best1O88870 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Best1O88870 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.59■□□□□ 0.09
Best1O88870 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.59■□□□□ 0.09
Best1O88870 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.59■□□□□ 0.09
Best1O88870 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.59■□□□□ 0.09
Best1O88870 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Best1O88870 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.59■□□□□ 0.09
Best1O88870 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.59■□□□□ 0.09
Best1O88870 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Best1O88870 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Best1O88870 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Best1O88870 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Best1O88870 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Best1O88870 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Best1O88870 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Best1O88870 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms