Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.85■□□□□ 0.77
Cops6O88545 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.85■□□□□ 0.77
Cops6O88545 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.85■□□□□ 0.77
Cops6O88545 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cops6O88545 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cops6O88545 Gm15590-201ENSMUST00000078419 552 ntBASIC19.85■□□□□ 0.77
Cops6O88545 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cops6O88545 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.85■□□□□ 0.77
Cops6O88545 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Cops6O88545 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cops6O88545 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.84■□□□□ 0.77
Cops6O88545 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.84■□□□□ 0.77
Cops6O88545 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
Cops6O88545 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
Cops6O88545 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cops6O88545 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cops6O88545 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops6O88545 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cops6O88545 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cops6O88545 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cops6O88545 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cops6O88545 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cops6O88545 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cops6O88545 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.83■□□□□ 0.77
Cops6O88545 Gm6550-201ENSMUST00000187574 993 ntBASIC19.83■□□□□ 0.77
Cops6O88545 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops6O88545 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops6O88545 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops6O88545 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops6O88545 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops6O88545 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Cops6O88545 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.82■□□□□ 0.76
Cops6O88545 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.82■□□□□ 0.76
Cops6O88545 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.82■□□□□ 0.76
Cops6O88545 AV026068-213ENSMUST00000223675 1171 ntBASIC19.82■□□□□ 0.76
Cops6O88545 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.82■□□□□ 0.76
Cops6O88545 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.82■□□□□ 0.76
Cops6O88545 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops6O88545 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cops6O88545 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.81■□□□□ 0.76
Cops6O88545 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Psmb5-202ENSMUST00000227257 622 ntBASIC19.81■□□□□ 0.76
Cops6O88545 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cops6O88545 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.81■□□□□ 0.76
Cops6O88545 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.81■□□□□ 0.76
Cops6O88545 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.81■□□□□ 0.76
Cops6O88545 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cops6O88545 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops6O88545 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Cops6O88545 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.8■□□□□ 0.76
Cops6O88545 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cops6O88545 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.8■□□□□ 0.76
Cops6O88545 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops6O88545 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms