Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pdlim1O70400 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim1O70400 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pdlim1O70400 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Pdlim1O70400 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.06■□□□□ 0.16
Pdlim1O70400 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.06■□□□□ 0.16
Pdlim1O70400 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.06■□□□□ 0.16
Pdlim1O70400 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.06■□□□□ 0.16
Pdlim1O70400 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.06■□□□□ 0.16
Pdlim1O70400 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.06■□□□□ 0.16
Pdlim1O70400 Gm21362-201ENSMUST00000194272 928 ntBASIC16.06■□□□□ 0.16
Pdlim1O70400 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.06■□□□□ 0.16
Pdlim1O70400 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.06■□□□□ 0.16
Pdlim1O70400 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pdlim1O70400 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.06■□□□□ 0.16
Pdlim1O70400 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim1O70400 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.05■□□□□ 0.16
Pdlim1O70400 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.05■□□□□ 0.16
Pdlim1O70400 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Gm7367-201ENSMUST00000057611 492 ntBASIC16.05■□□□□ 0.16
Pdlim1O70400 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pdlim1O70400 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Pdlim1O70400 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Pdlim1O70400 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pdlim1O70400 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim1O70400 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdlim1O70400 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdlim1O70400 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Pdlim1O70400 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pdlim1O70400 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdlim1O70400 Rprl3-201ENSMUST00000157400 290 ntBASIC16.04■□□□□ 0.16
Pdlim1O70400 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.04■□□□□ 0.16
Pdlim1O70400 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pdlim1O70400 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdlim1O70400 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.04■□□□□ 0.16
Pdlim1O70400 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pdlim1O70400 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim1O70400 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.03■□□□□ 0.16
Pdlim1O70400 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pdlim1O70400 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pdlim1O70400 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.03■□□□□ 0.16
Pdlim1O70400 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pdlim1O70400 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.03■□□□□ 0.16
Pdlim1O70400 Mir3081-201ENSMUST00000175305 84 ntBASIC16.03■□□□□ 0.16
Pdlim1O70400 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pdlim1O70400 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pdlim1O70400 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim1O70400 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms