Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.01□□□□□ -0.17
DffbO54788 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
DffbO54788 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.01□□□□□ -0.17
DffbO54788 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.01□□□□□ -0.17
DffbO54788 Gm10653-202ENSMUST00000139570 835 ntBASIC14.01□□□□□ -0.17
DffbO54788 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.01□□□□□ -0.17
DffbO54788 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.01□□□□□ -0.17
DffbO54788 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.01□□□□□ -0.17
DffbO54788 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DffbO54788 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14□□□□□ -0.17
DffbO54788 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14□□□□□ -0.17
DffbO54788 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DffbO54788 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14□□□□□ -0.17
DffbO54788 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DffbO54788 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
DffbO54788 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DffbO54788 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.99□□□□□ -0.17
DffbO54788 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
DffbO54788 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DffbO54788 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.99□□□□□ -0.17
DffbO54788 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DffbO54788 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DffbO54788 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.99□□□□□ -0.17
DffbO54788 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DffbO54788 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DffbO54788 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DffbO54788 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.98□□□□□ -0.17
DffbO54788 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.98□□□□□ -0.17
DffbO54788 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DffbO54788 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms