Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Phox2bO35690 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Phox2bO35690 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Phox2bO35690 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Phox2bO35690 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Phox2bO35690 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Gm13036-201ENSMUST00000117799 748 ntBASIC16.33■□□□□ 0.2
Phox2bO35690 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.33■□□□□ 0.2
Phox2bO35690 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.33■□□□□ 0.2
Phox2bO35690 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Phox2bO35690 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Phox2bO35690 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Phox2bO35690 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.32■□□□□ 0.2
Phox2bO35690 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.32■□□□□ 0.2
Phox2bO35690 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.32■□□□□ 0.2
Phox2bO35690 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.32■□□□□ 0.2
Phox2bO35690 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.32■□□□□ 0.2
Phox2bO35690 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.32■□□□□ 0.2
Phox2bO35690 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Phox2bO35690 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.32■□□□□ 0.2
Phox2bO35690 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phox2bO35690 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.31■□□□□ 0.2
Phox2bO35690 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Phox2bO35690 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Gm14716-201ENSMUST00000120138 718 ntBASIC16.31■□□□□ 0.2
Phox2bO35690 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.31■□□□□ 0.2
Phox2bO35690 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Phox2bO35690 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Phox2bO35690 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.31■□□□□ 0.2
Phox2bO35690 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.31■□□□□ 0.2
Phox2bO35690 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.31■□□□□ 0.2
Phox2bO35690 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.31■□□□□ 0.2
Phox2bO35690 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Phox2bO35690 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phox2bO35690 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Phox2bO35690 Gm6550-201ENSMUST00000187574 993 ntBASIC16.3■□□□□ 0.2
Phox2bO35690 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.3■□□□□ 0.2
Phox2bO35690 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC16.3■□□□□ 0.2
Phox2bO35690 Gm6991-201ENSMUST00000218475 1178 ntBASIC16.3■□□□□ 0.2
Phox2bO35690 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.3■□□□□ 0.2
Phox2bO35690 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phox2bO35690 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms