Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Npc1O35604 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Npc1O35604 Gm10819-201ENSMUST00000099988 561 ntBASIC15.9■□□□□ 0.14
Npc1O35604 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Npc1O35604 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.9■□□□□ 0.14
Npc1O35604 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Npc1O35604 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Npc1O35604 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.9■□□□□ 0.14
Npc1O35604 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Npc1O35604 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.9■□□□□ 0.14
Npc1O35604 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Npc1O35604 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Npc1O35604 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Npc1O35604 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Npc1O35604 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.89■□□□□ 0.13
Npc1O35604 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Npc1O35604 Dancr-204ENSMUST00000132389 2347 ntBASIC15.89■□□□□ 0.13
Npc1O35604 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Npc1O35604 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Npc1O35604 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.89■□□□□ 0.13
Npc1O35604 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.89■□□□□ 0.13
Npc1O35604 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.89■□□□□ 0.13
Npc1O35604 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.89■□□□□ 0.13
Npc1O35604 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.89■□□□□ 0.13
Npc1O35604 Gm18669-201ENSMUST00000216049 778 ntBASIC15.89■□□□□ 0.13
Npc1O35604 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Npc1O35604 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.88■□□□□ 0.13
Npc1O35604 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Npc1O35604 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Npc1O35604 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Npc1O35604 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Npc1O35604 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.87■□□□□ 0.13
Npc1O35604 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Npc1O35604 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Npc1O35604 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.87■□□□□ 0.13
Npc1O35604 Gm15794-201ENSMUST00000120182 631 ntBASIC15.87■□□□□ 0.13
Npc1O35604 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.87■□□□□ 0.13
Npc1O35604 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.87■□□□□ 0.13
Npc1O35604 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.87■□□□□ 0.13
Npc1O35604 Mir3081-201ENSMUST00000175305 84 ntBASIC15.87■□□□□ 0.13
Npc1O35604 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Npc1O35604 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.87■□□□□ 0.13
Npc1O35604 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Npc1O35604 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Npc1O35604 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Npc1O35604 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Npc1O35604 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms