Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.66■□□□□ 0.42
Clk2O35491 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.66■□□□□ 0.42
Clk2O35491 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Clk2O35491 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Clk2O35491 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Clk2O35491 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.66■□□□□ 0.42
Clk2O35491 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.66■□□□□ 0.42
Clk2O35491 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.66■□□□□ 0.42
Clk2O35491 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.66■□□□□ 0.42
Clk2O35491 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk2O35491 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Clk2O35491 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.65■□□□□ 0.42
Clk2O35491 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Clk2O35491 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.65■□□□□ 0.42
Clk2O35491 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Gm7862-201ENSMUST00000121461 292 ntBASIC17.65■□□□□ 0.42
Clk2O35491 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Clk2O35491 Gm6376-201ENSMUST00000209407 580 ntBASIC17.65■□□□□ 0.42
Clk2O35491 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Clk2O35491 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.65■□□□□ 0.42
Clk2O35491 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.65■□□□□ 0.42
Clk2O35491 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk2O35491 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clk2O35491 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Clk2O35491 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Clk2O35491 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.64■□□□□ 0.41
Clk2O35491 Gm44771-201ENSMUST00000206975 626 ntBASIC17.64■□□□□ 0.41
Clk2O35491 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.64■□□□□ 0.41
Clk2O35491 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Clk2O35491 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
Clk2O35491 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk2O35491 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Clk2O35491 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clk2O35491 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Clk2O35491 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.63■□□□□ 0.41
Clk2O35491 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clk2O35491 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.63■□□□□ 0.41
Clk2O35491 Gm9172-201ENSMUST00000212092 954 ntBASIC17.63■□□□□ 0.41
Clk2O35491 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.63■□□□□ 0.41
Clk2O35491 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Clk2O35491 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clk2O35491 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clk2O35491 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk2O35491 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Clk2O35491 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Clk2O35491 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk2O35491 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk2O35491 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.62■□□□□ 0.41
Clk2O35491 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clk2O35491 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk2O35491 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clk2O35491 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk2O35491 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk2O35491 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk2O35491 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.62■□□□□ 0.41
Clk2O35491 Gm4459-201ENSMUST00000118750 468 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms