Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Gm7284-201ENSMUST00000131667 944 ntBASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf11aO35305 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Gm27742-201ENSMUST00000184667 60 ntBASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf11aO35305 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf11aO35305 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.52■□□□□ 0.39
Tnfrsf11aO35305 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf11aO35305 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.5■□□□□ 0.39
Tnfrsf11aO35305 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf11aO35305 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms