Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ebf3O08791 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ebf3O08791 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ebf3O08791 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Ebf3O08791 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ebf3O08791 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.87■□□□□ 0.29
Ebf3O08791 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.87■□□□□ 0.29
Ebf3O08791 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.87■□□□□ 0.29
Ebf3O08791 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.87■□□□□ 0.29
Ebf3O08791 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.87■□□□□ 0.29
Ebf3O08791 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ebf3O08791 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ebf3O08791 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ebf3O08791 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Gm27867-201ENSMUST00000184778 125 ntBASIC16.86■□□□□ 0.29
Ebf3O08791 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.86■□□□□ 0.29
Ebf3O08791 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.86■□□□□ 0.29
Ebf3O08791 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ebf3O08791 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ebf3O08791 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ebf3O08791 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ebf3O08791 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ebf3O08791 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.86■□□□□ 0.29
Ebf3O08791 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ebf3O08791 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Ebf3O08791 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ebf3O08791 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ebf3O08791 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.85■□□□□ 0.29
Ebf3O08791 Gm5867-201ENSMUST00000063197 592 ntBASIC16.85■□□□□ 0.29
Ebf3O08791 Rps4l-201ENSMUST00000071745 943 ntBASIC16.85■□□□□ 0.29
Ebf3O08791 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.85■□□□□ 0.29
Ebf3O08791 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ebf3O08791 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ebf3O08791 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ebf3O08791 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ebf3O08791 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ebf3O08791 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.84■□□□□ 0.29
Ebf3O08791 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.84■□□□□ 0.29
Ebf3O08791 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ebf3O08791 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.84■□□□□ 0.29
Ebf3O08791 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Ebf3O08791 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms