Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
B020004C17RikJ3QP07 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.14■□□□□ 0.5
B020004C17RikJ3QP07 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Gm45167-201ENSMUST00000208007 322 ntBASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
B020004C17RikJ3QP07 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Auts2-212ENSMUST00000178555 309 ntBASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Gm27300-201ENSMUST00000184085 97 ntBASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Gm27335-201ENSMUST00000184758 97 ntBASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.13■□□□□ 0.49
B020004C17RikJ3QP07 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Gm15358-201ENSMUST00000119249 520 ntBASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
B020004C17RikJ3QP07 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Gm4899-201ENSMUST00000178708 719 ntBASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Gm10576-201ENSMUST00000191927 825 ntBASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
B020004C17RikJ3QP07 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
B020004C17RikJ3QP07 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms