Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn20G5E8X0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn20G5E8X0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cldn20G5E8X0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn20G5E8X0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cldn20G5E8X0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.21□□□□□ -0.13
Cldn20G5E8X0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cldn20G5E8X0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn20G5E8X0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cldn20G5E8X0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn20G5E8X0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn20G5E8X0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn20G5E8X0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Gm10517-202ENSMUST00000192970 758 ntBASIC14.2□□□□□ -0.14
Cldn20G5E8X0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cldn20G5E8X0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn20G5E8X0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn20G5E8X0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms