Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.81■□□□□ 0.28
Trim55G3X8Y1 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.81■□□□□ 0.28
Trim55G3X8Y1 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Gm42642-201ENSMUST00000200683 355 ntBASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim55G3X8Y1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Gm26571-201ENSMUST00000181399 666 ntBASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim55G3X8Y1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Gm42569-201ENSMUST00000200539 472 ntBASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.79■□□□□ 0.28
Trim55G3X8Y1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.78■□□□□ 0.28
Trim55G3X8Y1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Gm27405-201ENSMUST00000184201 112 ntBASIC16.78■□□□□ 0.28
Trim55G3X8Y1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim55G3X8Y1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms