Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh11xF6ZNL5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh11xF6ZNL5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh11xF6ZNL5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh11xF6ZNL5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh11xF6ZNL5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh11xF6ZNL5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh11xF6ZNL5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Pcdh11xF6ZNL5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh11xF6ZNL5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh11xF6ZNL5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.99■□□□□ 0.47
Pcdh11xF6ZNL5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms