Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Gm7222-201ENSMUST00000117512 906 ntBASIC19.52■□□□□ 0.72
Ube4aE9Q735 Gm13036-201ENSMUST00000117799 748 ntBASIC19.52■□□□□ 0.72
Ube4aE9Q735 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ube4aE9Q735 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Gm18622-201ENSMUST00000219361 595 ntBASIC19.52■□□□□ 0.72
Ube4aE9Q735 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ube4aE9Q735 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ube4aE9Q735 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ube4aE9Q735 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.52■□□□□ 0.71
Ube4aE9Q735 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ube4aE9Q735 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Gm11779-201ENSMUST00000118541 368 ntBASIC19.51■□□□□ 0.71
Ube4aE9Q735 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.51■□□□□ 0.71
Ube4aE9Q735 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.51■□□□□ 0.71
Ube4aE9Q735 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.51■□□□□ 0.71
Ube4aE9Q735 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.51■□□□□ 0.71
Ube4aE9Q735 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm8825-201ENSMUST00000182565 998 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm4518-201ENSMUST00000182638 718 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.5■□□□□ 0.71
Ube4aE9Q735 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.5■□□□□ 0.71
Ube4aE9Q735 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ube4aE9Q735 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ube4aE9Q735 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Gm27628-201ENSMUST00000184911 107 ntBASIC19.49■□□□□ 0.71
Ube4aE9Q735 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms