Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Gm44430-201ENSMUST00000203376 995 ntBASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh17E9PXF0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh17E9PXF0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh17E9PXF0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Gm12644-201ENSMUST00000119935 606 ntBASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms