Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm28043E0CXC2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Gm7791-201ENSMUST00000219066 539 ntBASIC16.37■□□□□ 0.21
Gm28043E0CXC2 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Gm28043E0CXC2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.36■□□□□ 0.21
Gm28043E0CXC2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Gm30025-201ENSMUST00000218555 728 ntBASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm28043E0CXC2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm28043E0CXC2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28043E0CXC2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms