Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn7aB1AYL1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn7aB1AYL1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn7aB1AYL1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Scn7aB1AYL1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn7aB1AYL1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.91■□□□□ 0.94
Scn7aB1AYL1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.91■□□□□ 0.94
Scn7aB1AYL1 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.91■□□□□ 0.94
Scn7aB1AYL1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn7aB1AYL1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn7aB1AYL1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Scn7aB1AYL1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Gm15358-201ENSMUST00000119249 520 ntBASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Gm5177-201ENSMUST00000183092 997 ntBASIC20.9■□□□□ 0.94
Scn7aB1AYL1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn7aB1AYL1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Scn7aB1AYL1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.89■□□□□ 0.94
Scn7aB1AYL1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.89■□□□□ 0.94
Scn7aB1AYL1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.89■□□□□ 0.94
Scn7aB1AYL1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Scn7aB1AYL1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scn7aB1AYL1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn7aB1AYL1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Gm18489-201ENSMUST00000172565 551 ntBASIC20.88■□□□□ 0.93
Scn7aB1AYL1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn7aB1AYL1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Scn7aB1AYL1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms