Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.91■□□□□ 0.14
Chd3B1AR17 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.91■□□□□ 0.14
Chd3B1AR17 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.91■□□□□ 0.14
Chd3B1AR17 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.91■□□□□ 0.14
Chd3B1AR17 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.9■□□□□ 0.14
Chd3B1AR17 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Chd3B1AR17 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.9■□□□□ 0.14
Chd3B1AR17 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Chd3B1AR17 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chd3B1AR17 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Chd3B1AR17 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.9■□□□□ 0.14
Chd3B1AR17 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.9■□□□□ 0.14
Chd3B1AR17 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.9■□□□□ 0.14
Chd3B1AR17 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chd3B1AR17 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Chd3B1AR17 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Chd3B1AR17 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.89■□□□□ 0.13
Chd3B1AR17 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chd3B1AR17 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Chd3B1AR17 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Chd3B1AR17 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd3B1AR17 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.88■□□□□ 0.13
Chd3B1AR17 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.88■□□□□ 0.13
Chd3B1AR17 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chd3B1AR17 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.88■□□□□ 0.13
Chd3B1AR17 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chd3B1AR17 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.88■□□□□ 0.13
Chd3B1AR17 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.88■□□□□ 0.13
Chd3B1AR17 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
Chd3B1AR17 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Chd3B1AR17 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd3B1AR17 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Gm13312-201ENSMUST00000119631 718 ntBASIC15.87■□□□□ 0.13
Chd3B1AR17 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Chd3B1AR17 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.87■□□□□ 0.13
Chd3B1AR17 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Chd3B1AR17 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd3B1AR17 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms