Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5640A3KG49 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.57■□□□□ 0.24
Gm5640A3KG49 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5640A3KG49 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.56■□□□□ 0.24
Gm5640A3KG49 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Gm2559-201ENSMUST00000201323 363 ntBASIC16.56■□□□□ 0.24
Gm5640A3KG49 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5640A3KG49 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Gm5640A3KG49 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.55■□□□□ 0.24
Gm5640A3KG49 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.55■□□□□ 0.24
Gm5640A3KG49 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.55■□□□□ 0.24
Gm5640A3KG49 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm5640A3KG49 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5640A3KG49 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Gm13148-201ENSMUST00000118892 745 ntBASIC16.54■□□□□ 0.24
Gm5640A3KG49 Gm10517-202ENSMUST00000192970 758 ntBASIC16.54■□□□□ 0.24
Gm5640A3KG49 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm5640A3KG49 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms