Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
IsxA1A546 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.2■□□□□ 0.02
IsxA1A546 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
IsxA1A546 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
IsxA1A546 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
IsxA1A546 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
IsxA1A546 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
IsxA1A546 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
IsxA1A546 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
IsxA1A546 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.19■□□□□ 0.02
IsxA1A546 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.19■□□□□ 0.02
IsxA1A546 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.19■□□□□ 0.02
IsxA1A546 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.19■□□□□ 0.02
IsxA1A546 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.19■□□□□ 0.02
IsxA1A546 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IsxA1A546 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.18■□□□□ 0.02
IsxA1A546 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
IsxA1A546 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.18■□□□□ 0.02
IsxA1A546 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.18■□□□□ 0.02
IsxA1A546 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.18■□□□□ 0.02
IsxA1A546 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.18■□□□□ 0.02
IsxA1A546 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
IsxA1A546 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
IsxA1A546 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IsxA1A546 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.17■□□□□ 0.02
IsxA1A546 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.17■□□□□ 0.02
IsxA1A546 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
IsxA1A546 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
IsxA1A546 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.17■□□□□ 0.02
IsxA1A546 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.17■□□□□ 0.02
IsxA1A546 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.17■□□□□ 0.02
IsxA1A546 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.17■□□□□ 0.02
IsxA1A546 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms